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  5. GSVIVT01025521001

GSVIVT01025521001


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0000631 (LandPlants) Phylogenetic Tree(s): OG_05_0000631_tree ,
OG_06_0003449 (SeedPlants) Phylogenetic Tree(s): OG_06_0003449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025521001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
AT4G23420 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
AT4G23430 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Archaeplastida
Gb_07739 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
LOC_Os01g05840.2 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
LOC_Os03g02460.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 Archaeplastida
LOC_Os10g40020.3 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.05 Archaeplastida
Solyc03g112540.4.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Solyc09g010510.4.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
Zm00001e016903_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
Zm00001e036623_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 35 183
No external refs found!