GSVIVT01025562001

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000250 (LandPlants) Phylogenetic Tree(s): OG_05_0000250_tree ,
OG_06_0012627 (SeedPlants) Phylogenetic Tree(s): OG_06_0012627_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025562001
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00088p00164440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00130p00044000	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.03	Archaeplastida
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.04	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.03	Archaeplastida
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.03	Archaeplastida
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.03	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.03	Archaeplastida
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.03	Archaeplastida
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.03	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.04	Archaeplastida
AT5G52830	ATWRKY27, WRKY27	WRKY DNA-binding protein 27	0.03	Archaeplastida
GSVIVT01012196001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01020864001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01021397001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01022067001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
GSVIVT01029265001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_23334	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_25334	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g40430.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g04640.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g27730.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
LOC_Os09g30400.3	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10436931g0040	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_46529g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c3_21440V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c4_26880V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Solyc01g079360.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc02g067430.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g072190.4.1	No alias	No annotation	0.03	Archaeplastida
Solyc07g056280.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc07g065260.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc09g066010.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e002033_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e007834_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e008447_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e017439_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e020229_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008373	sialyltransferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	358	414
IPR003657	WRKY_dom	196	250

External Links

No external refs found!

GSVIVT01025562001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation