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  5. GSVIVT01025818001

GSVIVT01025818001


No description available


Gene families : OG0005179 (Archaeplastida) Phylogenetic Tree(s): OG0005179_tree ,
OG_05_0006240 (LandPlants) Phylogenetic Tree(s): OG_05_0006240_tree ,
OG_06_0007496 (SeedPlants) Phylogenetic Tree(s): OG_06_0007496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025818001
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00039650 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
LOC_Os01g68760.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428202g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g06480.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g005110.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001202 WW_dom 294 324
IPR001202 WW_dom 249 279
No external refs found!