GSVIVT01026270001

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0000139 (LandPlants) Phylogenetic Tree(s): OG_05_0000139_tree ,
OG_06_0000189 (SeedPlants) Phylogenetic Tree(s): OG_06_0000189_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01026270001
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268740	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00018p00245180	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00034p00045070	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AMTR_s00069p00182480	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00078p00154520	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00079p00192440	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
AMTR_s00126p00068780	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AMTR_s00135p00117490	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00178p00018030	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AT1G01120	KCS1	3-ketoacyl-CoA synthase 1	0.02	Archaeplastida
AT1G04220	KCS2	3-ketoacyl-CoA synthase 2	0.02	Archaeplastida
AT1G07720	KCS3	3-ketoacyl-CoA synthase 3	0.04	Archaeplastida
AT1G25450	KCS5, CER60	3-ketoacyl-CoA synthase 5	0.03	Archaeplastida
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.04	Archaeplastida
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.08	Archaeplastida
AT2G26250	KCS10, FDH	3-ketoacyl-CoA synthase 10	0.04	Archaeplastida
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.08	Archaeplastida
AT4G34510	KCS17	3-ketoacyl-CoA synthase 17	0.03	Archaeplastida
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.07	Archaeplastida
Gb_05331	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Gb_06884	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_15941	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_17018	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_27864	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_32625	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_33820	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os02g11070.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os02g49920.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os03g12030.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os06g39750.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os09g19650.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os11g37900.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_10426663g0020	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_10429708g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
MA_10433600g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_105806g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_11217g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_339700g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
MA_415118g0020	No alias	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_759169g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_76149g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_91011g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.05	Archaeplastida
Pp3c2_4800V3.1	No alias	3-ketoacyl-CoA synthase 4	0.02	Archaeplastida
Pp3c8_1690V3.1	No alias	3-ketoacyl-CoA synthase 11	0.02	Archaeplastida
Pp3c8_6790V3.1	No alias	3-ketoacyl-CoA synthase 4	0.03	Archaeplastida
Smo231244	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Smo437285	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
Smo75021	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.01	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
Smo91671	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
Solyc02g063140.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Solyc05g009280.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc05g013220.2.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Solyc06g053870.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc06g053900.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Solyc08g067260.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc11g072980.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Solyc12g006820.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e000593_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e000868_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e001021_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e002667_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e004603_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e012803_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e016197_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e023474_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e038586_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Neighborhood
MF	GO:0004506	squalene monooxygenase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	37	323
IPR013747	ACP_syn_III_C	338	419

External Links

No external refs found!

GSVIVT01026270001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation