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  5. GSVIVT01027811001

GSVIVT01027811001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027811001
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00091p00025820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00096p00076220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.04 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.04 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.03 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.04 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.06 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 Archaeplastida
Cpa|evm.model.tig00021108.38 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02997 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22883 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_40628 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g49160.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g08590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_257850g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_62488g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_80033g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_89624g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.05 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017470_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018415_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020963_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!