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  5. GSVIVT01027983001

GSVIVT01027983001


Description : ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana


Gene families : OG0000285 (Archaeplastida) Phylogenetic Tree(s): OG0000285_tree ,
OG_05_0001759 (LandPlants) Phylogenetic Tree(s): OG_05_0001759_tree ,
OG_06_0001702 (SeedPlants) Phylogenetic Tree(s): OG_06_0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027983001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00247870 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein FIGL1... 0.05 Archaeplastida
AT1G50140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT4G02480 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000989.11 No alias ATPase family AAA domain-containing protein FIGL1... 0.01 Archaeplastida
Cpa|evm.model.tig00021179.32 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_10428622g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_199195g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida
MA_93384g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.05 Archaeplastida
Mp3g22890.1 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c5_8900V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Smo166381 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g110900.4.1 No alias ATPase family AAA domain-containing protein FIGL1... 0.08 Archaeplastida
Zm00001e001631_P001 No alias ATPase family AAA domain-containing protein FIGL1... 0.05 Archaeplastida
Zm00001e011359_P005 No alias ATPase family AAA domain-containing protein FIGL1... 0.08 Archaeplastida
Zm00001e021043_P002 No alias ATPase family AAA domain-containing protein FIGL1... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 1023 1152
No external refs found!