Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0008035 (SeedPlants) Phylogenetic Tree(s): OG_06_0008035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01028040001 | |
Cluster | HCCA: Cluster_177 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00230630 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00010p00161740 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
AMTR_s00071p00109420 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00033080 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.03 | Archaeplastida | |
AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.07 | Archaeplastida | |
AT2G45220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.07 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | Archaeplastida | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G51490 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.07 | Archaeplastida | |
AT5G51500 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.09 | Archaeplastida | |
GSVIVT01016667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01018620001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01018622001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01023135001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01027356001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
GSVIVT01031667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01037344001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01037348001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Gb_25439 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_35881 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
LOC_Os01g20980.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os01g57854.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os02g18650.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os05g29790.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os07g47830.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os08g34900.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os11g07090.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_10332149g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10372207g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_10377619g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
MA_10434624g0020 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
MA_10435891g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_130858g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_133919g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_158002g0020 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.05 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_51464g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_648837g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_84680g0010 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
MA_931259g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_96515g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c10_1100V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.05 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
Pp3c21_22110V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c4_22420V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Smo114014 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Smo266995 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
Solyc01g099960.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc02g080220.3.1 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Solyc03g123620.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc06g009190.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc06g034360.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g064190.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc09g075330.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc09g075350.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e011069_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Zm00001e017515_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Neighborhood |
MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
BP | GO:0009607 | response to biotic stimulus | IEP | Neighborhood |
BP | GO:0009617 | response to bacterium | IEP | Neighborhood |
BP | GO:0009620 | response to fungus | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
MF | GO:0030414 | peptidase inhibitor activity | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
BP | GO:0042742 | defense response to bacterium | IEP | Neighborhood |
BP | GO:0043207 | response to external biotic stimulus | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
BP | GO:0050832 | defense response to fungus | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
BP | GO:0051707 | response to other organism | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
MF | GO:0061134 | peptidase regulator activity | IEP | Neighborhood |
MF | GO:0061135 | endopeptidase regulator activity | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:0098542 | defense response to other organism | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No external refs found! |