GSVIVT01028050001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028050001
Cluster	HCCA: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.03	Archaeplastida
AT1G53170	ATERF8, ATERF-8, ERF8	ethylene response factor 8	0.03	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.02	Archaeplastida
AT2G33710	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.02	Archaeplastida
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.06	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01211	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01212	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_03368	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_12965	No alias	Ethylene-responsive transcription factor ABR1...	0.02	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
Gb_35015	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g21120.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.07	Archaeplastida
LOC_Os02g32140.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
LOC_Os04g34970.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g47790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g45110.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.05	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_18403g0020	No alias	Ethylene-responsive transcription factor RAP2-4...	0.03	Archaeplastida
MA_8552524g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Pp3c13_4270V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c1_7800V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c22_1800V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c23_21450V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c27_1350V3.1	No alias	ERF domain protein 12	0.02	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc07g054220.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc09g075420.3.1	No alias	transcription factor (ERF)	0.14	Archaeplastida
Zm00001e000608_P002	No alias	Ethylene-responsive transcription factor ERF073...	0.13	Archaeplastida
Zm00001e006692_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e010860_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e016421_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.12	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.12	Archaeplastida
Zm00001e033790_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.1	Archaeplastida
Zm00001e041533_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0004470	malic enzyme activity	IEP	Neighborhood
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0016615	malate dehydrogenase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	75	123

External Links

No external refs found!

GSVIVT01028050001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation