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  5. GSVIVT01028179001

GSVIVT01028179001


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028179001
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT1G70490 ARFA1D, ATARFA1D Ras-related small GTP-binding family protein 0.07 Archaeplastida
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.06 Archaeplastida
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.05 Archaeplastida
Cpa|evm.model.tig00021127.129 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Gb_07391 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os07g12200.1 No alias ARF-GTPase 0.04 Archaeplastida
MA_92857g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.03 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c9_17560V3.1 No alias ADP-ribosylation factor 3 0.03 Archaeplastida
Solyc01g100860.3.1 No alias ARF-GTPase 0.05 Archaeplastida
Solyc01g100870.3.1 No alias ARF-GTPase 0.08 Archaeplastida
Solyc07g006640.3.1 No alias ARF-GTPase 0.11 Archaeplastida
Zm00001e011790_P001 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e021566_P001 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 1 156
No external refs found!