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  5. AMTR_s00044p00042560

AMTR_s00044p00042560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.16

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00042560
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G06020 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020710.73 No alias No description available 0.01 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
GSVIVT01026319001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01033528001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.02 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os09g23200.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
MA_181986g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_52379g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c26_6050V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo270428 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc06g066180.4.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc08g005260.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Zm00001e015401_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027318_P001 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Zm00001e030689_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e031978_P001 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 20 71
No external refs found!