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  5. AMTR_s00044p00088410

AMTR_s00044p00088410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.61

Description : Cytoskeleton.microfilament network.actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00088410
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT5G59370 ACT4 actin 4 0.04 Archaeplastida
Gb_24792 No alias actin filament protein 0.02 Archaeplastida
Gb_25131 No alias actin filament protein 0.04 Archaeplastida
Gb_29180 No alias actin filament protein 0.02 Archaeplastida
LOC_Os03g50885.1 No alias actin filament protein 0.02 Archaeplastida
LOC_Os03g61970.1 No alias actin filament protein 0.04 Archaeplastida
LOC_Os10g36650.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.04 Archaeplastida
MA_7238328g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g078400.3.1 No alias actin filament protein 0.03 Archaeplastida
Solyc06g076090.3.1 No alias actin filament protein 0.04 Archaeplastida
Zm00001e004386_P001 No alias actin filament protein 0.03 Archaeplastida
Zm00001e005489_P002 No alias actin filament protein 0.02 Archaeplastida
Zm00001e006282_P001 No alias actin filament protein 0.03 Archaeplastida
Zm00001e012159_P001 No alias actin filament protein 0.02 Archaeplastida
Zm00001e012560_P001 No alias actin filament protein 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 26 398
No external refs found!