1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029796001

GSVIVT01029796001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000223 (SeedPlants) Phylogenetic Tree(s): OG_06_0000223_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029796001
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00104040 evm_27.TU.AmTr_v1... Protein YLS3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00010p00204620 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT4G08670 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.08 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01001181001 No alias No description available 0.06 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01018010001 No alias No description available 0.05 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_24349 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g57980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g57990.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g58940.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
MA_113140g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_115537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
MA_64802g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.02 Archaeplastida
Pp3c6_760V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Solyc01g005985.1.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc01g073680.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc01g105010.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Solyc03g005210.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g054030.2.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc06g054060.1.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065420.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065440.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g082270.4.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc09g082280.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g082290.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc09g082300.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e005960_P003 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e011462_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e011883_P002 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e032912_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 21 114
No external refs found!