GSVIVT01030515001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01030515001
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00077p00176570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G50260	DEAR1, CEJ1, ATERF#011	cooperatively regulated by ethylene and jasmonate 1	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.03	Archaeplastida
GSVIVT01035502001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_32806	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g34970.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Solyc02g077840.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g078640.3.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc10g009110.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e016421_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e026911_P005	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e038888_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041533_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0035434	copper ion transmembrane transport	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	19	68

External Links

No external refs found!

GSVIVT01030515001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation