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  5. GSVIVT01030843001

GSVIVT01030843001


Description : Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica


Gene families : OG0000434 (Archaeplastida) Phylogenetic Tree(s): OG0000434_tree ,
OG_05_0000373 (LandPlants) Phylogenetic Tree(s): OG_05_0000373_tree ,
OG_06_0002561 (SeedPlants) Phylogenetic Tree(s): OG_06_0002561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030843001
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g01916.1 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.03 Archaeplastida
MA_10435465g0010 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.02 Archaeplastida
MA_463g0010 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.02 Archaeplastida
Pp3c17_2200V3.1 No alias dsRNA-binding domain-like superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 109 168
IPR014720 dsRBD_dom 24 87
No external refs found!