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  5. GSVIVT01031405001

GSVIVT01031405001


Description : Cell wall.hemicellulose.heteromannan.synthesis.mannan synthase activities.CSLA-type mannan synthase


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000992 (LandPlants) Phylogenetic Tree(s): OG_05_0000992_tree ,
OG_06_0000659 (SeedPlants) Phylogenetic Tree(s): OG_06_0000659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031405001
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT1G23480 ATCSLA3, CSLA03,... cellulose synthase-like A3 0.05 Archaeplastida
AT2G35650 CSLA07,... cellulose synthase like 0.02 Archaeplastida
AT3G28180 ATCSLC04,... Cellulose-synthase-like C4 0.04 Archaeplastida
AT3G56000 ATCSLA14, CSLA14 cellulose synthase like A14 0.05 Archaeplastida
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.03 Archaeplastida
AT4G31590 ATCSLC05,... Cellulose-synthase-like C5 0.03 Archaeplastida
AT5G22740 CSLA02, ATCSLA2,... cellulose synthase-like A02 0.02 Archaeplastida
Gb_05418 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Gb_21966 No alias mannan synthase (CSLA) 0.06 Archaeplastida
Gb_24488 No alias 1,4-beta-glucan synthase (CSLC) 0.07 Archaeplastida
Gb_27616 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.06 Archaeplastida
Gb_28041 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os01g56130.1 No alias 1,4-beta-glucan synthase (CSLC) 0.08 Archaeplastida
LOC_Os03g56060.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os05g43530.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
MA_10426467g0020 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.03 Archaeplastida
MA_10429365g0010 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
MA_449559g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9381137g0010 No alias Probable xyloglucan glycosyltransferase 2 OS=Oryza... 0.04 Archaeplastida
MA_96942g0010 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Mp1g22770.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Pp3c14_13750V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.05 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Smo140200 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
Smo230176 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.07 Archaeplastida
Solyc04g077470.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Solyc08g006310.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.06 Archaeplastida
Solyc09g057640.4.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.07 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.08 Archaeplastida
Solyc12g088240.2.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Zm00001e020029_P001 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e022456_P001 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.06 Archaeplastida
Zm00001e028988_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Zm00001e032112_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Zm00001e034210_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Zm00001e035623_P002 No alias mannan synthase (CSLA) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 86 280
No external refs found!