GSVIVT01032082001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0001074 (LandPlants) Phylogenetic Tree(s): OG_05_0001074_tree ,
OG_06_0000731 (SeedPlants) Phylogenetic Tree(s): OG_06_0000731_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032082001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT3G63530 BB2, BB RING/U-box superfamily protein 0.03 Archaeplastida
LOC_Os03g07790.1 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Mp4g17160.1 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.03 Archaeplastida
Smo447294 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc03g118840.3.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Solyc08g006460.3.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Zm00001e000545_P002 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e034827_P002 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e038893_P003 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 195 237
No external refs found!