GSVIVT01032257001

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit

Gene families : OG0001090 (Archaeplastida) Phylogenetic Tree(s): OG0001090_tree ,
OG_05_0001880 (LandPlants) Phylogenetic Tree(s): OG_05_0001880_tree ,
OG_06_0002799 (SeedPlants) Phylogenetic Tree(s): OG_06_0002799_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01032257001
Cluster	HCCA: Cluster_152

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00101p00077050	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.acetyl-CoA...	0.05	Archaeplastida
AT5G35360	CAC2	acetyl Co-enzyme a carboxylase biotin carboxylase subunit	0.05	Archaeplastida
Cre08.g359350	No alias	Lipid metabolism.fatty acid synthesis.acetyl-CoA...	0.05	Archaeplastida
Gb_20361	No alias	biotin carboxylase subunit of polymeric acetyl-CoA...	0.03	Archaeplastida
MA_8514g0010	No alias	Biotin carboxylase 1, chloroplastic OS=Populus...	0.05	Archaeplastida
Mp6g09060.1	No alias	biotin carboxylase subunit of polymeric acetyl-CoA...	0.03	Archaeplastida
Pp3c24_4640V3.1	No alias	acetyl Co-enzyme a carboxylase biotin carboxylase subunit	0.02	Archaeplastida
Pp3c8_7840V3.1	No alias	acetyl Co-enzyme a carboxylase biotin carboxylase subunit	0.05	Archaeplastida
Solyc01g008330.4.1	No alias	biotin carboxylase subunit of polymeric acetyl-CoA...	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
BP	GO:0032465	regulation of cytokinesis	IEP	Neighborhood
BP	GO:0032954	regulation of cytokinetic process	IEP	Neighborhood
BP	GO:0032955	regulation of division septum assembly	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0051302	regulation of cell division	IEP	Neighborhood
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1901891	regulation of cell septum assembly	IEP	Neighborhood
BP	GO:1902412	regulation of mitotic cytokinesis	IEP	Neighborhood
BP	GO:1903436	regulation of mitotic cytokinetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	242	449
IPR005482	Biotin_COase_C	463	568
IPR005481	BC-like_N	130	237

External Links

No external refs found!

GSVIVT01032257001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation