GSVIVT01033166001

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease

Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0000881 (LandPlants) Phylogenetic Tree(s): OG_05_0000881_tree ,
OG_06_0007883 (SeedPlants) Phylogenetic Tree(s): OG_06_0007883_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033166001
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00205690	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.cysteine-type...	0.03	Archaeplastida
AMTR_s00135p00021060	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.cysteine-type...	0.05	Archaeplastida
AT1G17110	UBP15	ubiquitin-specific protease 15	0.03	Archaeplastida
AT3G14400	UBP25	ubiquitin-specific protease 25	0.03	Archaeplastida
AT4G24560	UBP16	ubiquitin-specific protease 16	0.05	Archaeplastida
AT5G57990	UBP23	ubiquitin-specific protease 23	0.04	Archaeplastida
Cpa\|evm.model.tig00000663.67	No alias	Protein degradation.peptidase families.cysteine-type...	0.01	Archaeplastida
Cpa\|evm.model.tig00000808.46	No alias	Protein degradation.peptidase families.cysteine-type...	0.02	Archaeplastida
Cre14.g629300	No alias	Protein degradation.peptidase families.cysteine-type...	0.01	Archaeplastida
Gb_09343	No alias	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os05g43480.1	No alias	deubiquitinase (UBP25)	0.04	Archaeplastida
LOC_Os06g44380.1	No alias	deubiquitinase (UBP15-21)	0.05	Archaeplastida
LOC_Os08g37350.1	No alias	deubiquitinase (UBP15-21)	0.05	Archaeplastida
LOC_Os09g28940.1	No alias	deubiquitinase (UBP15-21)	0.02	Archaeplastida
MA_10429414g0020	No alias	deubiquitinase (UBP15-21)	0.04	Archaeplastida
MA_10431488g0010	No alias	deubiquitinase (UBP23)	0.03	Archaeplastida
Mp1g03220.1	No alias	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.03	Archaeplastida
Mp2g05560.1	No alias	deubiquitinase (UBP15-21)	0.05	Archaeplastida
Mp3g16110.1	No alias	deubiquitinase (UBP23)	0.02	Archaeplastida
Pp3c13_23560V3.1	No alias	ubiquitin-specific protease 25	0.02	Archaeplastida
Pp3c5_25690V3.1	No alias	ubiquitin-specific protease 18	0.04	Archaeplastida
Pp3c6_5860V3.1	No alias	ubiquitin-specific protease 18	0.03	Archaeplastida
Pp3c7_9250V3.1	No alias	ubiquitin-specific protease 23	0.04	Archaeplastida
Smo420048	No alias	Protein degradation.peptidase families.cysteine-type...	0.03	Archaeplastida
Solyc04g076210.3.1	No alias	deubiquitinase (UBP15-21)	0.03	Archaeplastida
Solyc08g069050.3.1	No alias	deubiquitinase (UBP15-21)	0.05	Archaeplastida
Zm00001e022516_P001	No alias	deubiquitinase (UBP15-21)	0.03	Archaeplastida
Zm00001e024878_P003	No alias	deubiquitinase (UBP15-21)	0.04	Archaeplastida
Zm00001e027381_P003	No alias	deubiquitinase (UBP25)	0.04	Archaeplastida
Zm00001e032099_P001	No alias	deubiquitinase (UBP25)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0031369	translation initiation factor binding	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002893	Znf_MYND	11	48
IPR001394	Peptidase_C19_UCH	120	423

External Links

No external refs found!

GSVIVT01033166001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation