GSVIVT01036201001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01036201001
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00044590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.05	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.04	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G11140	CRF1	cytokinin response factor 1	0.06	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.04	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.03	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.06	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g21120.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.04	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g47790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os09g39850.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10427743g0020	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_180106g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.09	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.04	Archaeplastida
Solyc04g054910.4.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.09	Archaeplastida
Solyc08g078180.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g089910.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.04	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc10g009110.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e030090_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	78	128

External Links

No external refs found!

GSVIVT01036201001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation