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  5. AT1G49830

AT1G49830


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49830
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
GSVIVT01017050001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
LOC_Os01g13000.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g107490.2.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g120530.3.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e014179_P003 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021661_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e027157_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000060 protein import into nucleus, translocation IEP Neighborhood
BP GO:0001763 morphogenesis of a branching structure IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009838 abscission IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010074 maintenance of meristem identity IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010076 maintenance of floral meristem identity IEP Neighborhood
BP GO:0010077 maintenance of inflorescence meristem identity IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010094 specification of carpel identity IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
BP GO:0010219 regulation of vernalization response IEP Neighborhood
BP GO:0010220 positive regulation of vernalization response IEP Neighborhood
BP GO:0010223 secondary shoot formation IEP Neighborhood
BP GO:0010227 floral organ abscission IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010254 nectary development IEP Neighborhood
BP GO:0010346 shoot axis formation IEP Neighborhood
BP GO:0010434 bract formation IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0046620 regulation of organ growth IEP Neighborhood
BP GO:0046621 negative regulation of organ growth IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048442 sepal development IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048479 style development IEP Neighborhood
BP GO:0048480 stigma development IEP Neighborhood
BP GO:0048498 establishment of petal orientation IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048559 establishment of floral organ orientation IEP Neighborhood
BP GO:0048560 establishment of anatomical structure orientation IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048640 negative regulation of developmental growth IEP Neighborhood
BP GO:0048645 animal organ formation IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080006 internode patterning IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0090428 perianth development IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
BP GO:0090707 establishment of plant organ orientation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!