Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01037344001 | |
Cluster | HCCA: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
AMTR_s00129p00033080 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G02810 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G10710 | RHS12 | root hair specific 12 | 0.03 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT3G49220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | Archaeplastida | |
AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.03 | Archaeplastida | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G51490 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G64640 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
GSVIVT01023135001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.09 | Archaeplastida | |
GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01031165001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01031667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
Gb_03174 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_06354 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_24214 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os01g15039.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os02g18650.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os07g47830.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os08g34900.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os11g36240.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10332149g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10372207g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_10377619g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_10435891g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_130858g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_133919g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.02 | Archaeplastida | |
MA_2017g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_51464g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_84680g0010 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
MA_86577g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.04 | Archaeplastida | |
Pp3c18_22120V3.1 | No alias | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c26_2170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c4_22420V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo266995 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083840.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Zm00001e004056_P002 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e009863_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Zm00001e034231_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e036264_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e041006_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Neighborhood |
MF | GO:0004592 | pantoate-beta-alanine ligase activity | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0015939 | pantothenate metabolic process | IEP | Neighborhood |
BP | GO:0015940 | pantothenate biosynthetic process | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016229 | steroid dehydrogenase activity | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 1 | 145 |
No external refs found! |