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  5. GSVIVT01037362001

GSVIVT01037362001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0003831 (SeedPlants) Phylogenetic Tree(s): OG_06_0003831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037362001
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.04 Archaeplastida
GSVIVT01027810001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c24_11770V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e002919_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029601_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e030293_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 31 78
IPR001005 SANT/Myb 84 127
No external refs found!