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  5. GSVIVT01037528001

GSVIVT01037528001


Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG0000966 (Archaeplastida) Phylogenetic Tree(s): OG0000966_tree ,
OG_05_0001134 (LandPlants) Phylogenetic Tree(s): OG_05_0001134_tree ,
OG_06_0001034 (SeedPlants) Phylogenetic Tree(s): OG_06_0001034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037528001
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00140970 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT3G11910 UBP13 ubiquitin-specific protease 13 0.03 Archaeplastida
AT5G06600 UBP12 ubiquitin-specific protease 12 0.07 Archaeplastida
Cpa|evm.model.tig00001366.11 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre07.g336200 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g56490.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida
LOC_Os07g06950.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
LOC_Os11g36470.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
LOC_Os12g30540.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.07 Archaeplastida
MA_10426331g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
MA_10427483g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
MA_10427483g0020 No alias deubiquitinase (UBP12-13) 0.04 Archaeplastida
MA_10428769g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 Archaeplastida
Mp3g15430.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
Pp3c11_18780V3.1 No alias ubiquitin-specific protease 12 0.03 Archaeplastida
Pp3c15_15710V3.1 No alias ubiquitin-specific protease 12 0.03 Archaeplastida
Smo444302 No alias Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
Solyc05g055090.4.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
Solyc10g081610.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
Solyc11g071700.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
Zm00001e017788_P001 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
Zm00001e032871_P004 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida
Zm00001e039540_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR024729 USP7_ICP0-binding_dom 622 874
IPR001394 Peptidase_C19_UCH 197 518
IPR029346 USP_C 884 1094
IPR002083 MATH/TRAF_dom 59 179
No external refs found!