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  5. GSVIVT01037810001

GSVIVT01037810001


Description : Cell cycle.regulation.cyclins.CYCD-type cyclin


Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0000382 (LandPlants) Phylogenetic Tree(s): OG_05_0000382_tree ,
OG_06_0000715 (SeedPlants) Phylogenetic Tree(s): OG_06_0000715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037810001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AT3G50070 CYCD3;3 CYCLIN D3;3 0.04 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.06 Archaeplastida
GSVIVT01003674001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
Gb_03361 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os03g10650.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os07g37010.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os11g47950.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.02 Archaeplastida
MA_103834g0010 No alias cyclin (CYCD) 0.02 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.05 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.06 Archaeplastida
Pp3c15_17470V3.1 No alias CYCLIN D1;1 0.03 Archaeplastida
Smo15078 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
Smo412774 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e009982_P002 No alias cyclin (CYCD) 0.04 Archaeplastida
Zm00001e015910_P001 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e018000_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 62 185
IPR004367 Cyclin_C-dom 188 288
No external refs found!