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  5. Cre01.g012450

Cre01.g012450


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase


Gene families : OG0001713 (Archaeplastida) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g012450
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00211330 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00061p00204480 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G55860 UPL1 ubiquitin-protein ligase 1 0.1 Archaeplastida
AT1G70320 UPL2 ubiquitin-protein ligase 2 0.08 Archaeplastida
GSVIVT01009206001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01009208001 No alias E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01014697001 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_17424 No alias monomeric E3 ubiquitin ligase (HECT) 0.07 Archaeplastida
Gb_21632 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Gb_26784 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26785 No alias monomeric E3 ubiquitin ligase (HECT) 0.01 Archaeplastida
LOC_Os09g07900.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
LOC_Os12g24080.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
MA_20049g0010 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
MA_20049g0020 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7295g0020 No alias E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp4g21620.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Mp7g16120.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.01 Archaeplastida
Pp3c11_25020V3.1 No alias ubiquitin-protein ligase 1 0.02 Archaeplastida
Pp3c7_8070V3.1 No alias ubiquitin-protein ligase 1 0.03 Archaeplastida
Pp3c7_8076V3.1 No alias ubiquitin-protein ligase 1 0.03 Archaeplastida
Smo154179 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Solyc04g076620.4.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Solyc07g065630.4.1 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e017836_P002 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
Zm00001e039654_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR015940 UBA 1793 1829
IPR010314 E3_Ub_ligase_DUF913 469 1035
IPR025527 DUF4414 4120 4152
IPR025527 DUF4414 4199 4214
IPR025527 DUF4414 4169 4201
IPR025527 DUF4414 3996 4017
IPR010309 E3_Ub_ligase_DUF908 90 154
IPR010309 E3_Ub_ligase_DUF908 210 359
IPR000569 HECT_dom 5238 5546
No external refs found!