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Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor
Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre01.g018200 | |
| Cluster | HCCA: Cluster_134 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00050160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.01 | Archaeplastida | |
| AMTR_s00039p00203500 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | Archaeplastida | |
| AMTR_s00140p00029580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | Archaeplastida | |
| AMTR_s00146p00080830 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.01 | Archaeplastida | |
| AT1G05380 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.02 | Archaeplastida | |
| AT2G27980 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.04 | Archaeplastida | |
| AT2G36720 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.02 | Archaeplastida | |
| AT4G14920 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020563.181 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01014219001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | Archaeplastida | |
| GSVIVT01017972001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.05 | Archaeplastida | |
| GSVIVT01031451001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | Archaeplastida | |
| GSVIVT01033711001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | Archaeplastida | |
| Gb_06644 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.04 | Archaeplastida | |
| Gb_41247 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.01 | Archaeplastida | |
| LOC_Os03g53630.1 | No alias | PHD finger transcription factor | 0.02 | Archaeplastida | |
| LOC_Os04g59510.1 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| LOC_Os06g01170.1 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| LOC_Os07g07690.1 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida | |
| MA_139275g0010 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida | |
| MA_14500g0010 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.06 | Archaeplastida | |
| MA_3931g0010 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Mp2g04330.1 | No alias | PHD finger transcription factor | 0.06 | Archaeplastida | |
| Mp6g21090.2 | No alias | PHD finger transcription factor | 0.01 | Archaeplastida | |
| Pp3c1_22210V3.1 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.03 | Archaeplastida | |
| Pp3c25_4970V3.1 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.04 | Archaeplastida | |
| Pp3c25_9550V3.1 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.03 | Archaeplastida | |
| Solyc03g005170.3.1 | No alias | PHD finger transcription factor | 0.02 | Archaeplastida | |
| Solyc09g065340.3.1 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Solyc09g076010.3.1 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida | |
| Solyc10g083800.2.1 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Solyc10g084650.3.1 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Solyc11g066480.2.1 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida | |
| Zm00001e005667_P001 | No alias | PHD finger transcription factor | 0.06 | Archaeplastida | |
| Zm00001e012046_P003 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida | |
| Zm00001e013368_P001 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e032904_P002 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e042012_P001 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032308 | Jas | 1759 | 1798 |
| No external refs found! |