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  5. Cre01.g023787

Cre01.g023787


Description : ABC transporter F family member 1 OS=Arabidopsis thaliana


Gene families : OG0001462 (Archaeplastida) Phylogenetic Tree(s): OG0001462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g023787
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G64550 GCN3, ATGCN3 general control non-repressible 3 0.05 Archaeplastida
Cpa|evm.model.tig00000383.51 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00020629.98 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01019609001 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031505001 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os02g58020.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os08g45010.1 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.02 Archaeplastida
Mp6g18410.1 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c1_33790V3.1 No alias ABC transporter family protein 0.02 Archaeplastida
Pp3c2_12550V3.1 No alias ABC transporter family protein 0.03 Archaeplastida
Pp3c3_23080V3.1 No alias general control non-repressible 3 0.03 Archaeplastida
Pp3c5_11340V3.1 No alias ABC transporter family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 111 268
IPR032781 ABC_tran_Xtn 307 350
No external refs found!