Cre01.g035850

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component

Gene families : OG0001187 (Archaeplastida) Phylogenetic Tree(s): OG0001187_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g035850
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00084390	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
AMTR_s00071p00045940	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	Archaeplastida
AT3G07100	ERMO2, SEC24A	Sec23/Sec24 protein transport family protein	0.03	Archaeplastida
AT3G44340	CEF	clone eighty-four	0.04	Archaeplastida
Cpa\|evm.model.tig00000829.3	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
GSVIVT01014261001	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.04	Archaeplastida
GSVIVT01014611001	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	Archaeplastida
Gb_11357	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.03	Archaeplastida
Gb_26869	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.01	Archaeplastida
Gb_38621	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	Archaeplastida
LOC_Os04g04020.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
LOC_Os11g29200.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.04	Archaeplastida
LOC_Os12g24250.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.03	Archaeplastida
MA_10430919g0010	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	Archaeplastida
MA_10434705g0010	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.03	Archaeplastida
MA_45050g0010	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
MA_923164g0010	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.04	Archaeplastida
Mp7g13350.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.01	Archaeplastida
Mp7g13560.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
Pp3c1_17880V3.1	No alias	Sec23/Sec24 protein transport family protein	0.02	Archaeplastida
Pp3c2_16660V3.1	No alias	Sec23/Sec24 protein transport family protein	0.03	Archaeplastida
Smo140536	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
Smo157789	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
Solyc06g084210.3.1	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.04	Archaeplastida
Zm00001e008766_P001	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	Archaeplastida
Zm00001e021459_P002	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.07	Archaeplastida
Zm00001e040573_P001	No alias	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
CC	GO:0005669	transcription factor TFIID complex	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005801	cis-Golgi network	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008521	acetyl-CoA transmembrane transporter activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
BP	GO:0022406	membrane docking	IEP	Neighborhood
CC	GO:0030173	integral component of Golgi membrane	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Neighborhood
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Neighborhood
CC	GO:0031301	integral component of organelle membrane	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0042887	amide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0048278	vesicle docking	IEP	Neighborhood
MF	GO:0051184	cofactor transmembrane transporter activity	IEP	Neighborhood
MF	GO:0051185	coenzyme transmembrane transporter activity	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
MF	GO:0071077	adenosine 3',5'-bisphosphate transmembrane transporter activity	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood
BP	GO:0140029	exocytic process	IEP	Neighborhood
BP	GO:0140056	organelle localization by membrane tethering	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006896	Sec23/24_trunk_dom	475	710
IPR012990	Sec23_24_beta_S	715	800
IPR006900	Sec23/24_helical_dom	811	909
IPR006895	Znf_Sec23_Sec24	400	438

External Links

No external refs found!

Cre01.g035850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation