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  5. Cre02.g073650

Cre02.g073650


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MAC3 component


Gene families : OG0003024 (Archaeplastida) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g073650
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00212570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.01 Archaeplastida
AT2G33340 MAC3B MOS4-associated complex 3B 0.06 Archaeplastida
Cpa|evm.model.tig00001501.3 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
Cpa|evm.model.tig00001501.4 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
Cpa|evm.model.tig00021493.5 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01027911001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Gb_29380 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os10g32880.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
MA_20260g0010 No alias component MAC3 of non-snRNP MOS4-associated complex 0.01 Archaeplastida
Mp4g08560.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Pp3c5_9900V3.1 No alias MOS4-associated complex 3A 0.02 Archaeplastida
Pp3c6_19920V3.1 No alias MOS4-associated complex 3A 0.02 Archaeplastida
Smo437541 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Solyc09g090660.3.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e004625_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e012723_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006480 N-terminal protein amino acid methylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 281
IPR001680 WD40_repeat 383 415
IPR013915 Pre-mRNA_splic_Prp19 66 131
No external refs found!