Cre02.g098450

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component

Gene families : OG0003611 (Archaeplastida) Phylogenetic Tree(s): OG0003611_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g098450
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00256440	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation...	0.02	Archaeplastida
AMTR_s00059p00168200	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation...	0.02	Archaeplastida
AT1G04170	EIF2 GAMMA	eukaryotic translation initiation factor 2 gamma subunit	0.04	Archaeplastida
Cpa\|evm.model.tig00021433.27	No alias	Protein biosynthesis.translation...	0.05	Archaeplastida
GSVIVT01026269001	No alias	Protein biosynthesis.translation...	0.02	Archaeplastida
GSVIVT01034691001	No alias	Protein biosynthesis.translation...	0.02	Archaeplastida
LOC_Os12g07740.1	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.02	Archaeplastida
LOC_Os12g41400.1	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.06	Archaeplastida
MA_68521g0010	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.02	Archaeplastida
MA_6993g0010	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.04	Archaeplastida
Mp1g04790.1	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.04	Archaeplastida
Pp3c7_5020V3.1	No alias	eukaryotic translation initiation factor 2 gamma subunit	0.02	Archaeplastida
Solyc01g066690.3.1	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.03	Archaeplastida
Solyc05g054310.4.1	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.02	Archaeplastida
Solyc12g099470.2.1	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.03	Archaeplastida
Zm00001e010573_P001	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.05	Archaeplastida
Zm00001e035274_P001	No alias	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Neighborhood
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003729	mRNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003848	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	IEP	Neighborhood
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005849	mRNA cleavage factor complex	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006323	DNA packaging	IEP	Neighborhood
BP	GO:0006378	mRNA polyadenylation	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016778	diphosphotransferase activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
BP	GO:0030261	chromosome condensation	IEP	Neighborhood
BP	GO:0031123	RNA 3'-end processing	IEP	Neighborhood
BP	GO:0031124	mRNA 3'-end processing	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
MF	GO:0031369	translation initiation factor binding	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043631	RNA polyadenylation	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	267	349
IPR015256	TIF2_gsu_C	361	450
IPR000795	TF_GTP-bd_dom	34	235

External Links

No external refs found!

Cre02.g098450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation