AMTR_s00049p00054830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.31

Description : GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana


Gene families : OG0000147 (Archaeplastida) Phylogenetic Tree(s): OG0000147_tree ,
OG_05_0000060 (LandPlants) Phylogenetic Tree(s): OG_05_0000060_tree ,
OG_06_0010894 (SeedPlants) Phylogenetic Tree(s): OG_06_0010894_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00054830
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00147040 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G28590 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
GSVIVT01007554001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.05 Archaeplastida
Gb_09270 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16009 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16378 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16975 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11620.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os01g11660.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g11710.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os01g11750.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g11760.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g46120.1 No alias GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os01g46169.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g39155.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g62740.1 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g11950.1 No alias GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g11970.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g43090.1 No alias GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g03890.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os06g06250.2 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g34120.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os07g44780.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_190687g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_60155g0010 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp7g13650.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c2_2900V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
Smo34274 No alias GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo83754 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g099050.3.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006337_P001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e014225_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e020314_P001 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e024860_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026047_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026050_P001 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e027181_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e032079_P005 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e036463_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037096_P003 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 31 346
No external refs found!