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  5. Cre06.g250800

Cre06.g250800


No description available


Gene families : OG0001895 (Archaeplastida) Phylogenetic Tree(s): OG0001895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g250800
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G33680 No alias KH domain-containing protein 0.04 Archaeplastida
AT2G25970 No alias KH domain-containing protein 0.02 Archaeplastida
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01036378001 No alias No description available 0.02 Archaeplastida
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g01930.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_13061g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g07780.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g040370.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g095960.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e014452_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029163_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 2 62
IPR004088 KH_dom_type_1 82 144
IPR004088 KH_dom_type_1 175 236
IPR001202 WW_dom 368 395
No external refs found!