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  5. Cre06.g278224

Cre06.g278224


Description : 60S ribosomal protein L16, mitochondrial OS=Prototheca wickerhamii


Gene families : OG0002172 (Archaeplastida) Phylogenetic Tree(s): OG0002172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g278224
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02809p00000680 evm_27.TU.AmTr_v1... 50S ribosomal protein L16, chloroplastic OS=Amborella trichopoda 0.02 Archaeplastida
ATCG00790 RPL16 ribosomal protein L16 0.03 Archaeplastida
LOC_Os01g57958.1 No alias 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.01 Archaeplastida
LOC_Os04g16826.1 No alias 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.01 Archaeplastida
LOC_Os10g21344.1 No alias 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.01 Archaeplastida
Mp1g22400.1 No alias 60S ribosomal protein L16, mitochondrial OS=Marchantia... 0.02 Archaeplastida
Pp3c2_23477V3.1 No alias ribosomal protein L16 0.02 Archaeplastida
Solyc00g500032.1.1 No alias 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.03 Archaeplastida
Solyc00g500077.1.1 No alias 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005763 mitochondrial small ribosomal subunit IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 151 267
No external refs found!