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Description : Amino acid metabolism.biosynthesis.serine family.glycine.serine hydroxymethyltransferase
Gene families : OG0000522 (Archaeplastida) Phylogenetic Tree(s): OG0000522_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre06.g293950 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00262120 | evm_27.TU.AmTr_v1... | Amino acid metabolism.biosynthesis.serine... | 0.07 | Archaeplastida | |
| AT4G13930 | SHM4 | serine hydroxymethyltransferase 4 | 0.07 | Archaeplastida | |
| AT5G26780 | SHM2 | serine hydroxymethyltransferase 2 | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020903.25 | No alias | Enzyme classification.EC_2 transferases.EC_2.1... | 0.03 | Archaeplastida | |
| GSVIVT01009226001 | No alias | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.04 | Archaeplastida | |
| GSVIVT01021046001 | No alias | Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os11g26860.1 | No alias | Serine hydroxymethyltransferase 4 OS=Arabidopsis... | 0.06 | Archaeplastida | |
| Pp3c15_6270V3.1 | No alias | serine hydroxymethyltransferase 4 | 0.08 | Archaeplastida | |
| Smo166496 | No alias | Amino acid metabolism.biosynthesis.serine... | 0.05 | Archaeplastida | |
| Solyc05g053810.3.1 | No alias | serine hydroxymethyltransferase. serine hydroxymethyltransferase | 0.04 | Archaeplastida | |
| Solyc12g098490.2.1 | No alias | serine hydroxymethyltransferase. serine hydroxymethyltransferase | 0.02 | Archaeplastida | |
| Zm00001e021483_P001 | No alias | serine hydroxymethyltransferase. serine hydroxymethyltransferase | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0004359 | glutaminase activity | IEP | Neighborhood |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008818 | cobalamin 5'-phosphate synthase activity | IEP | Neighborhood |
| MF | GO:0008939 | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009235 | cobalamin metabolic process | IEP | Neighborhood |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | Neighborhood |
| MF | GO:0010181 | FMN binding | IEP | Neighborhood |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015689 | molybdate ion transport | IEP | Neighborhood |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0031419 | cobalamin binding | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Neighborhood |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Neighborhood |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | Neighborhood |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| MF | GO:0051073 | adenosylcobinamide-GDP ribazoletransferase activity | IEP | Neighborhood |
| BP | GO:0051186 | cofactor metabolic process | IEP | Neighborhood |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Neighborhood |
| MF | GO:0051287 | NAD binding | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |