Cre07.g334650


Description : DNA damage response.BRCA1–BARD1 DNA-damage response heterodimer.BRCA1|BARD1 component


Gene families : OG0001412 (Archaeplastida) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g334650
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00180030 evm_27.TU.AmTr_v1... DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 Archaeplastida
AMTR_s00092p00067800 evm_27.TU.AmTr_v1... DNA damage response.BRCA1–BARD1 DNA-damage response... 0.03 Archaeplastida
AT1G04020 BARD1, ROW1, ATBARD1 breast cancer associated RING 1 0.03 Archaeplastida
AT4G21070 BRCA1, ATBRCA1 breast cancer susceptibility1 0.02 Archaeplastida
Cpa|evm.model.tig00020537.14 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 Archaeplastida
Gb_00493 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.03 Archaeplastida
LOC_Os04g43300.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.04 Archaeplastida
LOC_Os05g43610.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.01 Archaeplastida
MA_12220g0020 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 Archaeplastida
MA_187851g0010 No alias Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... 0.01 Archaeplastida
MA_66542g0010 No alias Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... 0.05 Archaeplastida
Mp1g00070.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 Archaeplastida
Smo414577 No alias Protein biosynthesis.translation... 0.01 Archaeplastida
Solyc06g008210.4.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.05 Archaeplastida
Zm00001e007590_P001 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 Archaeplastida
Zm00001e014997_P002 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 Archaeplastida
Zm00001e032102_P001 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048478 replication fork protection IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 21 60
No external refs found!