Coexpression cluster: Cluster_88 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051716 cellular response to stimulus 4.29% (7/163) 3.69 1e-06 4.9e-05
GO:0033554 cellular response to stress 4.29% (7/163) 3.69 1e-06 4.9e-05
GO:0006974 cellular response to DNA damage stimulus 4.29% (7/163) 3.69 1e-06 4.9e-05
GO:0006259 DNA metabolic process 5.52% (9/163) 3.17 1e-06 0.000128
GO:0004386 helicase activity 3.07% (5/163) 4.28 5e-06 0.00015
GO:0006950 response to stress 4.29% (7/163) 3.38 5e-06 0.000167
GO:0050896 response to stimulus 4.29% (7/163) 3.29 7e-06 0.000187
GO:0006281 DNA repair 3.68% (6/163) 3.57 1.1e-05 0.000241
GO:0070035 purine NTP-dependent helicase activity 1.84% (3/163) 5.54 2.6e-05 0.000457
GO:0008026 ATP-dependent helicase activity 1.84% (3/163) 5.54 2.6e-05 0.000457
GO:0051052 regulation of DNA metabolic process 1.23% (2/163) 6.18 0.00025 0.004003
GO:0140097 catalytic activity, acting on DNA 2.45% (4/163) 3.34 0.000641 0.009403
GO:0006260 DNA replication 1.84% (3/163) 3.96 0.000897 0.01214
GO:0004003 ATP-dependent DNA helicase activity 1.23% (2/163) 5.18 0.001228 0.015442
GO:0042623 ATPase activity, coupled 1.84% (3/163) 3.65 0.001695 0.019887
GO:0003887 DNA-directed DNA polymerase activity 1.23% (2/163) 4.77 0.002265 0.024919
GO:0090304 nucleic acid metabolic process 5.52% (9/163) 1.63 0.002686 0.02781
GO:0034061 DNA polymerase activity 1.23% (2/163) 4.44 0.003597 0.035172
GO:0008094 DNA-dependent ATPase activity 1.23% (2/163) 4.31 0.00437 0.038456
GO:0006298 mismatch repair 1.23% (2/163) 4.31 0.00437 0.038456
GO:0016817 hydrolase activity, acting on acid anhydrides 4.29% (7/163) 1.75 0.004944 0.039549
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.29% (7/163) 1.76 0.004827 0.040453
GO:0006282 regulation of DNA repair 0.61% (1/163) 6.77 0.009188 0.046201
GO:0000725 recombinational repair 0.61% (1/163) 6.77 0.009188 0.046201
GO:0008156 negative regulation of DNA replication 0.61% (1/163) 6.77 0.009188 0.046201
GO:2000104 negative regulation of DNA-dependent DNA replication 0.61% (1/163) 6.77 0.009188 0.046201
GO:0090329 regulation of DNA-dependent DNA replication 0.61% (1/163) 6.77 0.009188 0.046201
GO:0051053 negative regulation of DNA metabolic process 0.61% (1/163) 6.77 0.009188 0.046201
GO:0080135 regulation of cellular response to stress 0.61% (1/163) 6.77 0.009188 0.046201
GO:0080134 regulation of response to stress 0.61% (1/163) 6.77 0.009188 0.046201
GO:0048478 replication fork protection 0.61% (1/163) 6.77 0.009188 0.046201
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 0.61% (1/163) 6.77 0.009188 0.046201
GO:2001020 regulation of response to DNA damage stimulus 0.61% (1/163) 6.77 0.009188 0.046201
GO:0000724 double-strand break repair via homologous recombination 0.61% (1/163) 6.77 0.009188 0.046201
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_58 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_69 0.038 Archaeplastida Compare
Gingko biloba HCCA Cluster_54 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_401 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.055 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_3 0.037 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_6 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_18 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_73 0.038 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_111 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_134 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_145 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_157 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_162 0.024 Archaeplastida Compare
Sequences (163) (download table)

InterPro Domains

GO Terms

Family Terms