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  5. Cre08.g373250

Cre08.g373250


Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-2 component


Gene families : OG0002864 (Archaeplastida) Phylogenetic Tree(s): OG0002864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g373250
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00056790 evm_27.TU.AmTr_v1... Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana 0.06 Archaeplastida
AT1G16470 PAB1 proteasome subunit PAB1 0.18 Archaeplastida
AT1G79210 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.09 Archaeplastida
Cpa|evm.model.tig00021357.40 No alias Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana 0.21 Archaeplastida
GSVIVT01012066001 No alias Protein degradation.26S proteasome.20S core... 0.08 Archaeplastida
Gb_09565 No alias component alpha type-2 of 26S proteasome 0.02 Archaeplastida
LOC_Os02g42320.3 No alias component alpha type-2 of 26S proteasome 0.08 Archaeplastida
LOC_Os03g26970.1 No alias component alpha type-2 of 26S proteasome 0.06 Archaeplastida
MA_10035305g0010 No alias Proteasome subunit alpha type-2-B OS=Arabidopsis... 0.02 Archaeplastida
MA_9995924g0010 No alias Proteasome subunit alpha type-2-B OS=Arabidopsis... 0.02 Archaeplastida
Mp3g16380.1 No alias component alpha type-2 of 26S proteasome 0.23 Archaeplastida
Pp3c11_10390V3.1 No alias proteasome subunit PAB1 0.11 Archaeplastida
Pp3c7_18410V3.1 No alias proteasome subunit PAB1 0.03 Archaeplastida
Smo177615 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc07g055080.3.1 No alias component alpha type-2 of 26S proteasome 0.04 Archaeplastida
Solyc10g008010.4.1 No alias component alpha type-2 of 26S proteasome 0.08 Archaeplastida
Zm00001e023061_P001 No alias component alpha type-2 of 26S proteasome 0.01 Archaeplastida
Zm00001e023064_P001 No alias component alpha type-2 of 26S proteasome 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 30 213
No external refs found!