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No description available
Gene families : OG0005377 (Archaeplastida) Phylogenetic Tree(s): OG0005377_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre08.g383650 | |
| Cluster | HCCA: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G32910 | No alias | CONTAINS InterPro DOMAIN/s: Nuclear pore complex... | 0.03 | Archaeplastida | |
| GSVIVT01035621001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | Archaeplastida | |
| LOC_Os01g54240.1 | No alias | NUP75/85 scaffold nucleoporin of nuclear pore complex | 0.08 | Archaeplastida | |
| Mp1g11600.1 | No alias | NUP75/85 scaffold nucleoporin of nuclear pore complex | 0.05 | Archaeplastida | |
| Pp3c16_3750V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Smo413557 | No alias | Nuclear pore complex protein NUP85 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Solyc08g066580.4.1 | No alias | NUP75/85 scaffold nucleoporin of nuclear pore complex | 0.06 | Archaeplastida | |
| Zm00001e019793_P001 | No alias | NUP75/85 scaffold nucleoporin of nuclear pore complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Neighborhood |
| BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Neighborhood |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0080009 | mRNA methylation | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011502 | Nucleoporin_Nup85 | 126 | 608 |
| No external refs found! |