Coexpression cluster: Cluster_62 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044428 nuclear part 3.85% (6/156) 3.86 3e-06 0.000296
GO:0005515 protein binding 13.46% (21/156) 1.65 3e-06 0.000578
GO:0005643 nuclear pore 1.92% (3/156) 5.83 1.3e-05 0.000772
GO:0005634 nucleus 4.49% (7/156) 2.99 2.9e-05 0.001269
GO:0016071 mRNA metabolic process 2.56% (4/156) 4.31 4.5e-05 0.001583
GO:0043231 intracellular membrane-bounded organelle 4.49% (7/156) 2.68 0.000113 0.002503
GO:0043227 membrane-bounded organelle 4.49% (7/156) 2.68 0.000113 0.002503
GO:0016070 RNA metabolic process 5.77% (9/156) 2.29 0.000102 0.003013
GO:0017056 structural constituent of nuclear pore 1.28% (2/156) 6.24 0.000229 0.004507
GO:0006397 mRNA processing 1.92% (3/156) 4.33 0.000414 0.007332
GO:0006396 RNA processing 3.21% (5/156) 2.54 0.001736 0.027927
GO:0090304 nucleic acid metabolic process 5.77% (9/156) 1.69 0.001995 0.029427
GO:0044424 intracellular part 8.33% (13/156) 1.27 0.002925 0.039828
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_250 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_175 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_178 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_328 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.057 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_363 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_148 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_32 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.039 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_503 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_535 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.074 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_172 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.053 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.045 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_134 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_139 0.019 Archaeplastida Compare
Sequences (156) (download table)

InterPro Domains

GO Terms

Family Terms