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  5. AMTR_s00050p00224980

AMTR_s00050p00224980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00050.91

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00224980
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00269080 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00051p00177750 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00083p00122040 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00121p00041090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 104 311
No external refs found!