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Description : RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DAWDLE pri-miRNA-DCL1 association factor
Gene families : OG0006269 (Archaeplastida) Phylogenetic Tree(s): OG0006269_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre09.g390430 | |
| Cluster | HCCA: Cluster_135 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01030604001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | Archaeplastida | |
| Gb_31066 | No alias | pri-miRNA-DCL1 association factor (DAWDLE) | 0.01 | Archaeplastida | |
| LOC_Os05g46780.1 | No alias | pri-miRNA-DCL1 association factor (DAWDLE) | 0.02 | Archaeplastida | |
| Mp7g08770.1 | No alias | pri-miRNA-DCL1 association factor (DAWDLE) | 0.03 | Archaeplastida | |
| Solyc10g006390.3.1 | No alias | pri-miRNA-DCL1 association factor (DAWDLE) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Neighborhood |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Neighborhood |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000253 | FHA_dom | 333 | 422 |
| No external refs found! |