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  5. Cre09.g392542

Cre09.g392542


Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component


Gene families : OG0000350 (Archaeplastida) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g392542
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00225350 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
AT1G77300 LAZ2, CCR1,... histone methyltransferases(H3-K4 specific);histone... 0.03 Archaeplastida
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.03 Archaeplastida
GSVIVT01008805001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
GSVIVT01024266001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Gb_04139 No alias class III/Trithorax histone methyltransferase component... 0.02 Archaeplastida
Gb_24492 No alias Histone-lysine N-methyltransferase ASHH1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g34976.2 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
MA_18041g0010 No alias class III/Trithorax histone methyltransferase component... 0.02 Archaeplastida
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.02 Archaeplastida
Mp8g18560.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Pp3c1_33770V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.02 Archaeplastida
Pp3c2_12540V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.02 Archaeplastida
Solyc06g059960.4.1 No alias class II/ASH1 histone methyltransferase component of... 0.05 Archaeplastida
Solyc07g008460.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Solyc07g008500.2.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e008120_P001 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e014806_P003 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e039307_P005 No alias class III/Trithorax histone methyltransferase component... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 210 316
IPR011124 Znf_CW 50 95
No external refs found!