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  5. AMTR_s00053p00115370

AMTR_s00053p00115370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.65

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.BOP transcriptional co-activator


Gene families : OG0003191 (Archaeplastida) Phylogenetic Tree(s): OG0003191_tree ,
OG_05_0002787 (LandPlants) Phylogenetic Tree(s): OG_05_0002787_tree ,
OG_06_0002815 (SeedPlants) Phylogenetic Tree(s): OG_06_0002815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00115370
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT3G57130 BOP1 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.02 Archaeplastida
GSVIVT01033571001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.04 Archaeplastida
LOC_Os11g04600.1 No alias transcriptional co-activator (BOP) 0.08 Archaeplastida
LOC_Os12g04410.1 No alias transcriptional co-activator (BOP) 0.07 Archaeplastida
Solyc10g079750.2.1 No alias transcriptional co-activator (BOP) 0.03 Archaeplastida
Zm00001e009187_P001 No alias transcriptional co-activator (BOP) 0.03 Archaeplastida
Zm00001e018649_P001 No alias transcriptional co-activator (BOP) 0.02 Archaeplastida
Zm00001e028331_P001 No alias transcriptional co-activator (BOP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR024228 NPR_central_dom 202 245
IPR020683 Ankyrin_rpt-contain_dom 248 334
No external refs found!