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  5. Cre13.g566900

Cre13.g566900


Description : DNA damage response.BRCC DNA-damage response complex.BRCA2 component


Gene families : OG0005452 (Archaeplastida) Phylogenetic Tree(s): OG0005452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g566900
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00030650 evm_27.TU.AmTr_v1... DNA damage response.BRCC DNA-damage response... 0.04 Archaeplastida
AT4G00020 EDA20,... BREAST CANCER 2 like 2A 0.04 Archaeplastida
GSVIVT01030280001 No alias DNA damage response.BRCC DNA-damage response... 0.04 Archaeplastida
Gb_10450 No alias DMC1-recombinase recruitment protein (BRCA2) 0.03 Archaeplastida
LOC_Os01g07110.1 No alias DMC1-recombinase recruitment protein (BRCA2). component... 0.03 Archaeplastida
MA_91494g0010 No alias DMC1-recombinase recruitment protein (BRCA2) 0.07 Archaeplastida
Solyc02g050200.2.1 No alias DMC1-recombinase recruitment protein (BRCA2). component... 0.06 Archaeplastida
Solyc02g050210.2.1 No alias DMC1-recombinase recruitment protein (BRCA2). component... 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015187 BRCA2_OB_1 2419 2552
IPR015252 BRCA2_hlx 2359 2412
No external refs found!