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  5. Cre14.g610950

Cre14.g610950


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component


Gene families : OG0003655 (Archaeplastida) Phylogenetic Tree(s): OG0003655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g610950
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272050 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida
AMTR_s00002p00272080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
AT4G14800 PBD2 20S proteasome beta subunit D2 0.14 Archaeplastida
Cpa|evm.model.tig00020554.80 No alias Protein degradation.26S proteasome.20S core... 0.11 Archaeplastida
GSVIVT01001182001 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Gb_19480 No alias Proteasome subunit beta type-2-A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_19481 No alias Proteasome subunit beta type-2-A OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g48930.1 No alias component beta type-4 of 26S proteasome 0.08 Archaeplastida
MA_119122g0010 No alias Proteasome subunit beta type-2-B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp4g04320.1 No alias component beta type-4 of 26S proteasome 0.16 Archaeplastida
Pp3c20_18180V3.1 No alias 20S proteasome beta subunit D1 0.07 Archaeplastida
Pp3c9_3580V3.1 No alias 20S proteasome beta subunit D2 0.01 Archaeplastida
Smo165201 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Solyc09g082320.3.1 No alias component beta type-4 of 26S proteasome 0.18 Archaeplastida
Zm00001e005337_P001 No alias component beta type-4 of 26S proteasome 0.04 Archaeplastida
Zm00001e012245_P001 No alias component beta type-4 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 5 181
No external refs found!