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  5. Cre16.g673550

Cre16.g673550


Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose-1-phosphate isomerase


Gene families : OG0002790 (Archaeplastida) Phylogenetic Tree(s): OG0002790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g673550
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT2G05830 No alias NagB/RpiA/CoA transferase-like superfamily protein 0.02 Archaeplastida
LOC_Os04g57410.1 No alias methylthioribose kinase 0.01 Archaeplastida
LOC_Os11g11050.1 No alias methylthioribose-1-phosphate isomerase 0.02 Archaeplastida
Zm00001e041896_P002 No alias methylthioribose kinase 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0044237 cellular metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002575 Aminoglycoside_PTrfase 491 726
IPR000649 IF-2B-related 111 419
No external refs found!