Coexpression cluster: Cluster_92 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 8.06% (5/62) 4.35 4e-06 0.000229
GO:0043436 oxoacid metabolic process 9.68% (6/62) 3.84 4e-06 0.000243
GO:0006082 organic acid metabolic process 9.68% (6/62) 3.84 4e-06 0.000243
GO:0019752 carboxylic acid metabolic process 9.68% (6/62) 3.85 4e-06 0.000463
GO:1901605 alpha-amino acid metabolic process 6.45% (4/62) 5.46 2e-06 0.000487
GO:1901607 alpha-amino acid biosynthetic process 4.84% (3/62) 5.35 5.2e-05 0.002197
GO:0008652 cellular amino acid biosynthetic process 4.84% (3/62) 4.94 0.000125 0.004557
GO:0044281 small molecule metabolic process 9.68% (6/62) 2.44 0.00081 0.025811
GO:0046394 carboxylic acid biosynthetic process 4.84% (3/62) 3.86 0.001149 0.026645
GO:0016053 organic acid biosynthetic process 4.84% (3/62) 3.86 0.001149 0.026645
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 1.61% (1/62) 8.16 0.003495 0.028747
GO:0009098 leucine biosynthetic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0050993 dimethylallyl diphosphate metabolic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0050992 dimethylallyl diphosphate biosynthetic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0046490 isopentenyl diphosphate metabolic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0006423 cysteinyl-tRNA aminoacylation 1.61% (1/62) 8.16 0.003495 0.028747
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.61% (1/62) 8.16 0.003495 0.028747
GO:0009240 isopentenyl diphosphate biosynthetic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0003852 2-isopropylmalate synthase activity 1.61% (1/62) 8.16 0.003495 0.028747
GO:0006551 leucine metabolic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0004664 prephenate dehydratase activity 1.61% (1/62) 8.16 0.003495 0.028747
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 1.61% (1/62) 8.16 0.003495 0.028747
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0004817 cysteine-tRNA ligase activity 1.61% (1/62) 8.16 0.003495 0.028747
GO:0009094 L-phenylalanine biosynthetic process 1.61% (1/62) 8.16 0.003495 0.028747
GO:0004834 tryptophan synthase activity 1.61% (1/62) 8.16 0.003495 0.028747
GO:0016836 hydro-lyase activity 3.23% (2/62) 5.16 0.001397 0.029691
GO:0044283 small molecule biosynthetic process 4.84% (3/62) 3.27 0.003728 0.029706
GO:0009072 aromatic amino acid family metabolic process 3.23% (2/62) 5.35 0.001064 0.030156
GO:0044237 cellular metabolic process 22.58% (14/62) 1.26 0.001563 0.030662
GO:0016835 carbon-oxygen lyase activity 3.23% (2/62) 4.99 0.001773 0.032302
GO:0003674 molecular_function 45.16% (28/62) 0.71 0.002287 0.03888
GO:0044249 cellular biosynthetic process 9.68% (6/62) 1.81 0.007029 0.038966
GO:0009082 branched-chain amino acid biosynthetic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.61% (1/62) 7.16 0.006977 0.039539
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0009081 branched-chain amino acid metabolic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0006558 L-phenylalanine metabolic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0006568 tryptophan metabolic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.61% (1/62) 7.16 0.006977 0.039539
GO:0006586 indolalkylamine metabolic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0031072 heat shock protein binding 1.61% (1/62) 7.16 0.006977 0.039539
GO:0042430 indole-containing compound metabolic process 1.61% (1/62) 7.16 0.006977 0.039539
GO:0005488 binding 29.03% (18/62) 0.89 0.005562 0.042979
GO:0005737 cytoplasm 3.23% (2/62) 3.84 0.008606 0.044786
GO:0003824 catalytic activity 27.42% (17/62) 0.87 0.008457 0.044925
GO:0008152 metabolic process 25.81% (16/62) 0.95 0.006219 0.045313
GO:1901576 organic substance biosynthetic process 9.68% (6/62) 1.76 0.008409 0.045626
GO:0009987 cellular process 22.58% (14/62) 1.05 0.006102 0.045764
GO:0032787 monocarboxylic acid metabolic process 3.23% (2/62) 3.8 0.009027 0.046038
GO:0006529 asparagine biosynthetic process 1.61% (1/62) 6.58 0.010448 0.047577
GO:0006528 asparagine metabolic process 1.61% (1/62) 6.58 0.010448 0.047577
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.61% (1/62) 6.58 0.010448 0.047577
GO:0006383 transcription by RNA polymerase III 1.61% (1/62) 6.58 0.010448 0.047577
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_43 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_146 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_281 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_251 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_117 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_72 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_233 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_155 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_53 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_191 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_61 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_166 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_194 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_282 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_73 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_124 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_151 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_231 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_274 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.023 Archaeplastida Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms