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  5. Cre16.g674950

Cre16.g674950


Description : Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum


Gene families : OG0002780 (Archaeplastida) Phylogenetic Tree(s): OG0002780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g674950
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.02 Archaeplastida
AT1G57770 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.06 Archaeplastida
Cpa|evm.model.tig00001258.10 No alias No description available 0.02 Archaeplastida
LOC_Os03g62510.1 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.01 Archaeplastida
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.02 Archaeplastida
Pp3c2_2830V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.02 Archaeplastida
Pp3c8_1640V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.02 Archaeplastida
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.04 Archaeplastida
Zm00001e011669_P002 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 55 543
No external refs found!