1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00057p00092720

AMTR_s00057p00092720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.69

Description : Calmodulin-binding protein 60 B OS=Arabidopsis thaliana


Gene families : OG0000559 (Archaeplastida) Phylogenetic Tree(s): OG0000559_tree ,
OG_05_0000828 (LandPlants) Phylogenetic Tree(s): OG_05_0000828_tree ,
OG_06_0011485 (SeedPlants) Phylogenetic Tree(s): OG_06_0011485_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00092720
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G73805 No alias Calmodulin binding protein-like 0.08 Archaeplastida
AT2G24300 No alias Calmodulin-binding protein 0.03 Archaeplastida
AT4G31000 No alias Calmodulin-binding protein 0.04 Archaeplastida
AT5G26920 CBP60G Cam-binding protein 60-like G 0.06 Archaeplastida
AT5G57580 No alias Calmodulin-binding protein 0.04 Archaeplastida
AT5G62570 No alias Calmodulin binding protein-like 0.16 Archaeplastida
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.11 Archaeplastida
GSVIVT01003724001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01007816001 No alias Calmodulin-binding protein 60 A OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01008323001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01008324001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031210001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os01g04280.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os02g08120.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g18960.1 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g36110.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os12g36940.1 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc01g100240.3.1 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g079040.3.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc03g113980.3.1 No alias Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc03g119250.4.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.13 Archaeplastida
Solyc10g009210.4.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc12g036390.2.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e013802_P001 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e014847_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e016998_P001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e039693_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012416 CBP60 88 373
No external refs found!