AMTR_s00061p00087560 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.63

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor

Gene families : OG0004974 (Archaeplastida) Phylogenetic Tree(s): OG0004974_tree ,
OG_05_0004977 (LandPlants) Phylogenetic Tree(s): OG_05_0004977_tree ,
OG_06_0005945 (SeedPlants) Phylogenetic Tree(s): OG_06_0005945_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00061p00087560
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Solyc12g011270.2.1 No alias EF-Ts translation elongation factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014039 Transl_elong_EFTs/EF1B_dimer 123 373
No external refs found!